Difference between revisions of "SJ05096"
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(Created page with "Category:gene == Gene SJ01354 == * transcription-direction: ** negative * right-end-position: ** 44687 * left-end-position: ** 27866 * centisome-position: ** 18.307842...") |
(Created page with "Category:gene == Gene SJ17680 == * transcription-direction: ** positive * right-end-position: ** 192067 * left-end-position: ** 170657 * centisome-position: ** 25.533195...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ17680 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 192067 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 170657 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 25.533195 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[RXN-15117]] | |
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-5462]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-5463]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
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== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7817]] |
| − | ** ''' | + | ** '''6''' reactions found over '''16''' reactions in the full pathway |
| − | * [[ | + | * [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]] |
| − | ** ''' | + | ** '''16''' reactions found over '''19''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | {{#set: transcription-direction=positive}} |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=192067}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=170657}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=25.533195 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
{{#set: nb pathway associated=2}} | {{#set: nb pathway associated=2}} | ||
Revision as of 15:24, 5 January 2021
Contents
Gene SJ17680
- transcription-direction:
- positive
- right-end-position:
- 192067
- left-end-position:
- 170657
- centisome-position:
- 25.533195
Organism(s) associated with this gene
Reaction(s) associated
- RXN-15117
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-5462
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-5463
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7817
- 6 reactions found over 16 reactions in the full pathway
- MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
- 16 reactions found over 19 reactions in the full pathway
