Difference between revisions of "SJ05099"

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(Created page with "Category:gene == Gene SJ10727 == * transcription-direction: ** negative * right-end-position: ** 26947 * left-end-position: ** 5676 * centisome-position: ** 20.837769...")
(Created page with "Category:gene == Gene SJ19798 == * transcription-direction: ** positive * right-end-position: ** 60924 * left-end-position: ** 53572 * centisome-position: ** 24.351795...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10727 ==
+
== Gene SJ19798 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 26947
+
** 60924
 
* left-end-position:
 
* left-end-position:
−
** 5676
+
** 53572
 
* centisome-position:
 
* centisome-position:
−
** 20.837769    
+
** 24.351795    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15117]]
+
* [[ATPASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
* [[RXN-5470]]
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7817]]
+
* [[PWY-7210]]
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
+
* [[PWY-7198]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7184]]
−
{{#set: right-end-position=26947}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=5676}}
+
* [[PWY-6545]]
−
{{#set: centisome-position=20.837769   }}
+
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=60924}}
 +
{{#set: left-end-position=53572}}
 +
{{#set: centisome-position=24.351795   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}

Revision as of 18:47, 14 January 2021

Gene SJ19798

  • transcription-direction:
    • positive
  • right-end-position:
    • 60924
  • left-end-position:
    • 53572
  • centisome-position:
    • 24.351795

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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