Difference between revisions of "SJ05115"
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(Created page with "Category:gene == Gene SJ07277 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 4.2.2.10-RXN ** Catego...") |
(Created page with "Category:gene == Gene SJ19310 == * transcription-direction: ** negative * right-end-position: ** 190464 * left-end-position: ** 180889 * centisome-position: ** 79.16714...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ19310 == |
| + | * transcription-direction: | ||
| + | ** negative | ||
| + | * right-end-position: | ||
| + | ** 190464 | ||
| + | * left-end-position: | ||
| + | ** 180889 | ||
| + | * centisome-position: | ||
| + | ** 79.16714 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[PROTOHEMEFERROCHELAT-RXN]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-17518]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY0-1415]] |
| − | ** ''' | + | ** '''5''' reactions found over '''4''' reactions in the full pathway |
| + | * [[HEMESYN2-PWY]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[HEME-BIOSYNTHESIS-II]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-7766]] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=190464}} | ||
| + | {{#set: left-end-position=180889}} | ||
| + | {{#set: centisome-position=79.16714 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=2}} | {{#set: nb reaction associated=2}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 18:43, 14 January 2021
Contents
Gene SJ19310
- transcription-direction:
- negative
- right-end-position:
- 190464
- left-end-position:
- 180889
- centisome-position:
- 79.16714
Organism(s) associated with this gene
Reaction(s) associated
- PROTOHEMEFERROCHELAT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-17518
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY0-1415
- 5 reactions found over 4 reactions in the full pathway
- HEMESYN2-PWY
- 3 reactions found over 4 reactions in the full pathway
- HEME-BIOSYNTHESIS-II
- 4 reactions found over 4 reactions in the full pathway
- PWY-7766
- 3 reactions found over 5 reactions in the full pathway
