Difference between revisions of "SJ05166"
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(Created page with "Category:gene == Gene SJ00435 == * transcription-direction: ** negative * right-end-position: ** 14819 * left-end-position: ** 4842 * centisome-position: ** 2.900096 =...") |
(Created page with "Category:gene == Gene SJ16959 == * transcription-direction: ** negative * right-end-position: ** 641345 * left-end-position: ** 619584 * centisome-position: ** 90.847694...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ16959 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 641345 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 619584 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 90.847694 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | + | * [[3.6.4.5-RXN]] | |
− | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[ATPASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * | + | * [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]] |
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-12195]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-12196]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[RXN0-5462]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
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== Pathway(s) associated == | == Pathway(s) associated == | ||
− | + | * [[PWY-6545]] | |
− | + | ** '''8''' reactions found over '''9''' reactions in the full pathway | |
− | + | * [[PWY-7210]] | |
− | + | ** '''8''' reactions found over '''8''' reactions in the full pathway | |
− | + | * [[PWY-7198]] | |
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− | * [[PWY- | ||
− | ** ''' | ||
− | * [[PWY- | ||
− | ** ''' | ||
− | * [[PWY- | ||
** '''6''' reactions found over '''7''' reactions in the full pathway | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-7184]] |
− | ** ''' | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
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{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=641345}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=619584}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=90.847694 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 08:15, 15 March 2021
Contents
Gene SJ16959
- transcription-direction:
- negative
- right-end-position:
- 641345
- left-end-position:
- 619584
- centisome-position:
- 90.847694
Organism(s) associated with this gene
Reaction(s) associated
- 3.6.4.5-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- ATPASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- NUCLEOSIDE-TRIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12195
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12196
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5462
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway
- PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway