Difference between revisions of "SJ05197"

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(Created page with "Category:gene == Gene SJ07228 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-8025 ** Category:...")
(Created page with "Category:gene == Gene SJ05197 == * transcription-direction: ** negative * right-end-position: ** 286464 * left-end-position: ** 271039 * centisome-position: ** 54.148346...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07228 ==
+
== Gene SJ05197 ==
 +
* transcription-direction:
 +
** negative
 +
* right-end-position:
 +
** 286464
 +
* left-end-position:
 +
** 271039
 +
* centisome-position:
 +
** 54.148346   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-8025]]
+
* [[RXN-9839]]
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** Category: [[manual]]
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** Category: [[annotation]]
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8026]]
 
−
** Category: [[manual]]
 
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
−
* [[RXN1F-152]]
 
−
** Category: [[manual]]
 
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
−
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7638]]
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* [[PWY-6082]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
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** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5944]]
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* [[PWY-6073]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5288]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
{{#set: right-end-position=286464}}
 +
{{#set: left-end-position=271039}}
 +
{{#set: centisome-position=54.148346    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:07, 18 March 2021

Gene SJ05197

  • transcription-direction:
    • negative
  • right-end-position:
    • 286464
  • left-end-position:
    • 271039
  • centisome-position:
    • 54.148346

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6082
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6073
    • 3 reactions found over 3 reactions in the full pathway




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