Difference between revisions of "SJ05257"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SINAPALDEHYDE SINAPALDEHYDE] == * common-name: ** sinapaldehyde * smiles: ** coc1(c=c(c=cc=o)c=...")
 
(Created page with "Category:gene == Gene SJ05257 == * transcription-direction: ** positive * right-end-position: ** 462901 * left-end-position: ** 429145 * centisome-position: ** 86.03514...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SINAPALDEHYDE SINAPALDEHYDE] ==
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== Gene SJ05257 ==
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* common-name:
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* transcription-direction:
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** sinapaldehyde
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** positive
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* smiles:
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* right-end-position:
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** coc1(c=c(c=cc=o)c=c(oc)c(o)=1)
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** 462901
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* inchi-key:
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* left-end-position:
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** cdicdsogtrchmg-onegzznksa-n
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** 429145
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* molecular-weight:
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* centisome-position:
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** 208.213
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** 86.03514   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-1124]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-1125]]
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== Reaction(s) associated ==
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* [[RXN-8014]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to produce the compound ==
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* [[3.2.1.21-RXN]]
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* [[RXN-1124]]
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** Category: [[annotation]]
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* [[RXN-1143]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[3.2.1.39-RXN]]
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{{#set: common-name=sinapaldehyde}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=cdicdsogtrchmg-onegzznksa-n}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=208.213}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-10769]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10773]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13602]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13603]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14179]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-5341]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8036]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9674]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6788]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7091]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7092]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-3121]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5176]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6002]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=462901}}
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{{#set: left-end-position=429145}}
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{{#set: centisome-position=86.03514    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=10}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:01, 18 March 2021

Gene SJ05257

  • transcription-direction:
    • positive
  • right-end-position:
    • 462901
  • left-end-position:
    • 429145
  • centisome-position:
    • 86.03514

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6788
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7091
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7092
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3121
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5176
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6002
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05257&oldid=132152"