Difference between revisions of "SJ05258"

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(Created page with "Category:gene == Gene SJ16188 == * transcription-direction: ** positive * right-end-position: ** 57551 * left-end-position: ** 49355 * centisome-position: ** 17.24427...")
(Created page with "Category:gene == Gene SJ05258 == * transcription-direction: ** negative * right-end-position: ** 481707 * left-end-position: ** 469958 * centisome-position: ** 94.21734...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16188 ==
+
== Gene SJ05258 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 57551
+
** 481707
 
* left-end-position:
 
* left-end-position:
−
** 49355
+
** 469958
 
* centisome-position:
 
* centisome-position:
−
** 17.24427    
+
** 94.21734    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.4.1.67-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[2.4.1.82-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ALPHAGALACTOSID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[RXN-11501]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-11502]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[RXN-12088]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17830]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-5337]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6524]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-6525]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY0-1301]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6527]]
−
{{#set: right-end-position=57551}}
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=49355}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=17.24427   }}
+
{{#set: right-end-position=481707}}
 +
{{#set: left-end-position=469958}}
 +
{{#set: centisome-position=94.21734   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:01, 18 March 2021

Gene SJ05258

  • transcription-direction:
    • negative
  • right-end-position:
    • 481707
  • left-end-position:
    • 469958
  • centisome-position:
    • 94.21734

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5337
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6524
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY0-1301
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6527
    • 7 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05258&oldid=132158"