Difference between revisions of "SJ05274"

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(Created page with "Category:gene == Gene SJ02916 == * transcription-direction: ** positive * right-end-position: ** 353977 * left-end-position: ** 348095 * centisome-position: ** 65.543625...")
(Created page with "Category:gene == Gene SJ05274 == * transcription-direction: ** negative * right-end-position: ** 51204 * left-end-position: ** 50296 * centisome-position: ** 53.19795...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02916 ==
+
== Gene SJ05274 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 353977
+
** 51204
 
* left-end-position:
 
* left-end-position:
−
** 348095
+
** 50296
 
* centisome-position:
 
* centisome-position:
−
** 65.543625    
+
** 53.19795    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
+
* [[3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[HBNOm]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RETINOL-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN]]
+
* [[RXN-12581]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PURINE-NUCLEOSIDASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-363]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-366]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17728]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY66-368]]
−
* [[PWY-6153]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY66-367]]
−
* [[PWY-6154]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6151]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-I9]]
 
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6754]]
+
* [[PWY-6872]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY0-1391]]
+
* [[PWY-7782]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''11''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-6596]]
+
{{#set: transcription-direction=negative}}
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=51204}}
−
* [[PWY-6607]]
+
{{#set: left-end-position=50296}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=53.19795   }}
−
* [[PWY-6606]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6599]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=353977}}
 
−
{{#set: left-end-position=348095}}
 
−
{{#set: centisome-position=65.543625   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ05274

  • transcription-direction:
    • negative
  • right-end-position:
    • 51204
  • left-end-position:
    • 50296
  • centisome-position:
    • 53.19795

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-368
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-367
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6872
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05274&oldid=133317"