Difference between revisions of "SJ05275"

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(Created page with "Category:gene == Gene SJ08912 == * transcription-direction: ** positive * right-end-position: ** 316288 * left-end-position: ** 311868 * centisome-position: ** 72.637245...")
(Created page with "Category:gene == Gene SJ05275 == * transcription-direction: ** negative * right-end-position: ** 61388 * left-end-position: ** 60483 * centisome-position: ** 63.97271...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08912 ==
+
== Gene SJ05275 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 316288
+
** 61388
 
* left-end-position:
 
* left-end-position:
−
** 311868
+
** 60483
 
* centisome-position:
 
* centisome-position:
−
** 72.637245    
+
** 63.97271    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.10.1-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ESTRADIOL-17-BETA-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[2.7.12.1-RXN]]
+
* [[HBNOm]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RETINOL-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-KINASE-RXN]]
+
* [[RXN-12581]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17728]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14906]]
+
* [[TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
</div>
−
{{#set: right-end-position=316288}}
+
== Pathway(s) associated ==
−
{{#set: left-end-position=311868}}
+
* [[PWY66-368]]
−
{{#set: centisome-position=72.637245   }}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-367]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-380]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6872]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7782]]
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=61388}}
 +
{{#set: left-end-position=60483}}
 +
{{#set: centisome-position=63.97271   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=5}}

Latest revision as of 11:08, 18 March 2021

Gene SJ05275

  • transcription-direction:
    • negative
  • right-end-position:
    • 61388
  • left-end-position:
    • 60483
  • centisome-position:
    • 63.97271

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-368
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-367
    • 4 reactions found over 5 reactions in the full pathway
  • PWY66-380
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6872
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05275&oldid=135615"