Difference between revisions of "SJ05317"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10280 CPD-10280] == * common-name: ** lignoceroyl-coa * smiles: ** cccccccccccccccccccccccc...")
 
(Created page with "Category:gene == Gene SJ05317 == * transcription-direction: ** negative * right-end-position: ** 30370 * left-end-position: ** 8805 * centisome-position: ** 9.355278 =...")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10280 CPD-10280] ==
+
== Gene SJ05317 ==
−
* common-name:
+
* transcription-direction:
−
** lignoceroyl-coa
+
** negative
−
* smiles:
+
* right-end-position:
−
** cccccccccccccccccccccccc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
+
** 30370
−
* inchi-key:
+
* left-end-position:
−
** moymqyzwiukggy-jbkavqfisa-j
+
** 8805
−
* molecular-weight:
+
* centisome-position:
−
** 1114.129
+
** 9.355278   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[ACECOATRANS-RXN-CPD-10280/ACET//TETRACOSANOATE/ACETYL-COA.42.]]
+
* [[S.japonica_carotenoid_curated]]
−
* [[RXN-13296]]
+
== Reaction(s) associated ==
−
* [[RXN-16415-TETRACOSANOATE/ATP/CO-A//CPD-10280/AMP/PPI.43.]]
+
* [[ALANINE--TRNA-LIGASE-RXN]]
−
* [[THIOESTER-RXN[CCO-CYTOSOL]-CPD-10280/WATER//TETRACOSANOATE/CO-A/PROTON.57.]]
+
** Category: [[annotation]]
−
== Reaction(s) known to produce the compound ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13308]]
+
** Category: [[orthology]]
−
* [[RXN-16415-TETRACOSANOATE/ATP/CO-A//CPD-10280/AMP/PPI.43.]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10280/NAD//CPD-14282/NADH/PROTON.37.]]
+
== Pathway(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
* [[TRNA-CHARGING-PWY]]
−
{{#set: common-name=lignoceroyl-coa}}
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
{{#set: inchi-key=inchikey=moymqyzwiukggy-jbkavqfisa-j}}
+
{{#set: transcription-direction=negative}}
−
{{#set: molecular-weight=1114.129}}
+
{{#set: right-end-position=30370}}
 +
{{#set: left-end-position=8805}}
 +
{{#set: centisome-position=9.355278    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=1}}

Latest revision as of 11:03, 18 March 2021

Gene SJ05317

  • transcription-direction:
    • negative
  • right-end-position:
    • 30370
  • left-end-position:
    • 8805
  • centisome-position:
    • 9.355278

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05317&oldid=133098"