Difference between revisions of "SJ05332"

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(Created page with "Category:gene == Gene SJ02934 == * transcription-direction: ** negative * right-end-position: ** 126484 * left-end-position: ** 124355 * centisome-position: ** 97.64975...")
(Created page with "Category:gene == Gene SJ11169 == * transcription-direction: ** negative * right-end-position: ** 152638 * left-end-position: ** 149960 * centisome-position: ** 39.695583...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02934 ==
+
== Gene SJ11169 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 126484
+
** 152638
 
* left-end-position:
 
* left-end-position:
−
** 124355
+
** 149960
 
* centisome-position:
 
* centisome-position:
−
** 97.64975    
+
** 39.695583    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15117]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[orthology]]
+
* [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-5472]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ENOYL-COA-DELTA-ISOM-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12519]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13721]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-6384]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7836]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7931]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7817]]
+
* [[VALDEG-PWY]]
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
** '''6''' reactions found over '''8''' reactions in the full pathway
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
+
* [[PWY-5137]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[FAO-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6837]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-3941]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7574]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5138]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7291]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=126484}}
+
{{#set: right-end-position=152638}}
−
{{#set: left-end-position=124355}}
+
{{#set: left-end-position=149960}}
−
{{#set: centisome-position=97.64975   }}
+
{{#set: centisome-position=39.695583   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=8}}

Revision as of 14:48, 5 January 2021

Gene SJ11169

  • transcription-direction:
    • negative
  • right-end-position:
    • 152638
  • left-end-position:
    • 149960
  • centisome-position:
    • 39.695583

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • VALDEG-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-5137
    • 1 reactions found over 1 reactions in the full pathway
  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6837
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-3941
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7574
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5138
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7291
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05332&oldid=56051"