Difference between revisions of "SJ05398"

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(Created page with "Category:gene == Gene SJ16950 == * transcription-direction: ** negative * right-end-position: ** 521708 * left-end-position: ** 506485 * centisome-position: ** 74.264336...")
(Created page with "Category:gene == Gene SJ21571 == == Organism(s) associated with this gene == * S.japonica_sterols_curated == Reaction(s) associated == * PItm ** Category: ortho...")
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[[Category:gene]]
 
[[Category:gene]]
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== Gene SJ16950 ==
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== Gene SJ21571 ==
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* transcription-direction:
 
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** negative
 
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* right-end-position:
 
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** 521708
 
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* left-end-position:
 
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** 506485
 
−
* centisome-position:
 
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** 74.264336   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PItm]]
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[F16BDEPHOS-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[TCM3]]
 +
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[TCP26]]
 +
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
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* [[TCX10]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[SUGAR-PHOSPHATASE-RXN]]
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* [[TRANS-RXN0-470]]
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** Category: [[annotation]]
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** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
</div>
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
== Pathway(s) associated ==
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{{#set: organism associated=S.japonica_sterols_curated}}
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* [[P185-PWY]]
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{{#set: nb reaction associated=5}}
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY66-399]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[SUCSYN-PWY]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[CALVIN-PWY]]
 
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** '''12''' reactions found over '''13''' reactions in the full pathway
 
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* [[GLUCONEO-PWY]]
 
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** '''12''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-5484]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[GLYCOLYSIS]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=521708}}
 
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{{#set: left-end-position=506485}}
 
−
{{#set: centisome-position=74.264336    }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=4}}
 
−
{{#set: nb pathway associated=7}}
 

Revision as of 20:29, 18 December 2020

Gene SJ21571

Organism(s) associated with this gene

Reaction(s) associated


Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05398&oldid=45369"