Difference between revisions of "SJ05430"

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(Created page with "Category:gene == Gene SJ08693 == * transcription-direction: ** positive * right-end-position: ** 355625 * left-end-position: ** 342448 * centisome-position: ** 78.8591...")
(Created page with "Category:gene == Gene SJ05430 == * transcription-direction: ** negative * right-end-position: ** 206965 * left-end-position: ** 199439 * centisome-position: ** 40.20356...")
 
(3 intermediate revisions by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08693 ==
+
== Gene SJ05430 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 355625
+
** 206965
 
* left-end-position:
 
* left-end-position:
−
** 342448
+
** 199439
 
* centisome-position:
 
* centisome-position:
−
** 78.8591    
+
** 40.20356    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
* [[1.11.1.15-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PEROXID-RXN]]
+
* [[ACID-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
+
* [[RXN-5822]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5468]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[PWY-6348]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7445]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5466]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6824]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5469]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[NADPHOS-DEPHOS-PWY]]
−
{{#set: right-end-position=355625}}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=342448}}
+
* [[PWY-5083]]
−
{{#set: centisome-position=78.8591   }}
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[NAD-BIOSYNTHESIS-II]]
 +
** '''4''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=206965}}
 +
{{#set: left-end-position=199439}}
 +
{{#set: centisome-position=40.20356   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:10, 18 March 2021

Gene SJ05430

  • transcription-direction:
    • negative
  • right-end-position:
    • 206965
  • left-end-position:
    • 199439
  • centisome-position:
    • 40.20356

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6348
    • 1 reactions found over 1 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05430&oldid=136548"