Difference between revisions of "SJ05430"

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(Created page with "Category:gene == Gene SJ21571 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * PItm ** Category: or...")
(Created page with "Category:gene == Gene SJ05430 == * transcription-direction: ** negative * right-end-position: ** 206965 * left-end-position: ** 199439 * centisome-position: ** 40.20356...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21571 ==
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== Gene SJ05430 ==
 +
* transcription-direction:
 +
** negative
 +
* right-end-position:
 +
** 206965
 +
* left-end-position:
 +
** 199439
 +
* centisome-position:
 +
** 40.20356   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PItm]]
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[TCM3]]
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* [[ACID-PHOSPHATASE-RXN]]
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** Category: [[orthology]]
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** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-5822]]
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* [[TCP26]]
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** Category: [[annotation]]
−
** Category: [[orthology]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
== Pathway(s) associated ==
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PWY-6348]]
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* [[TCX10]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** Category: [[orthology]]
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* [[NADPHOS-DEPHOS-PWY]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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** '''3''' reactions found over '''3''' reactions in the full pathway
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PWY-5083]]
−
* [[TRANS-RXN0-470]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
−
** Category: [[orthology]]
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* [[NAD-BIOSYNTHESIS-II]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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** '''4''' reactions found over '''3''' reactions in the full pathway
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=206965}}
 +
{{#set: left-end-position=199439}}
 +
{{#set: centisome-position=40.20356    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:10, 18 March 2021

Gene SJ05430

  • transcription-direction:
    • negative
  • right-end-position:
    • 206965
  • left-end-position:
    • 199439
  • centisome-position:
    • 40.20356

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6348
    • 1 reactions found over 1 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05430&oldid=136548"