Difference between revisions of "SJ05483"

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(Created page with "Category:gene == Gene SJ07983 == * transcription-direction: ** negative * right-end-position: ** 287793 * left-end-position: ** 263989 * centisome-position: ** 59.23804...")
(Created page with "Category:gene == Gene SJ05483 == * transcription-direction: ** positive * right-end-position: ** 473424 * left-end-position: ** 461375 * centisome-position: ** 93.11716...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07983 ==
+
== Gene SJ05483 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 287793
+
** 473424
 
* left-end-position:
 
* left-end-position:
−
** 263989
+
** 461375
 
* centisome-position:
 
* centisome-position:
−
** 59.23804    
+
** 93.11716    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.14.19.3-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-11680]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11681]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11682]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13426]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-16065]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-16132]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[RXN-17112]]
−
{{#set: right-end-position=287793}}
+
** Category: [[orthology]]
−
{{#set: left-end-position=263989}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: centisome-position=59.23804   }}
+
* [[RXN-8347]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6000]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6603]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5353]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7049]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7606]]
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7726]]
 +
** '''8''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-6958]]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=473424}}
 +
{{#set: left-end-position=461375}}
 +
{{#set: centisome-position=93.11716   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=9}}
 +
{{#set: nb pathway associated=7}}

Latest revision as of 11:07, 18 March 2021

Gene SJ05483

  • transcription-direction:
    • positive
  • right-end-position:
    • 473424
  • left-end-position:
    • 461375
  • centisome-position:
    • 93.11716

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6000
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6603
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5353
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-7049
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7606
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-7726
    • 8 reactions found over 13 reactions in the full pathway
  • PWY-6958
    • 5 reactions found over 8 reactions in the full pathway




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