Difference between revisions of "SJ05642"
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(Created page with "Category:gene == Gene SJ20680 == * transcription-direction: ** negative * right-end-position: ** 94819 * left-end-position: ** 93143 * centisome-position: ** 45.48176...") |
(Created page with "Category:gene == Gene SJ05642 == * transcription-direction: ** positive * right-end-position: ** 29711 * left-end-position: ** 17645 * centisome-position: ** 19.636538...") |
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| (One intermediate revision by one other user not shown) | |||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ05642 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 29711 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 17645 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 19.636538 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[DCDT]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[DUDT]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[HDS]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-15878]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[RXN0-882]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[NONMEVIPP-PWY]] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7560]] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=29711}} | ||
| + | {{#set: left-end-position=17645}} | ||
| + | {{#set: centisome-position=19.636538 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
| + | {{#set: nb pathway associated=2}} | ||
Latest revision as of 11:03, 18 March 2021
Contents
Gene SJ05642
- transcription-direction:
- positive
- right-end-position:
- 29711
- left-end-position:
- 17645
- centisome-position:
- 19.636538
Organism(s) associated with this gene
Reaction(s) associated
- DCDT
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- DUDT
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- HDS
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- RXN-15878
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-882
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- NONMEVIPP-PWY
- 9 reactions found over 9 reactions in the full pathway
- PWY-7560
- 9 reactions found over 9 reactions in the full pathway
