Difference between revisions of "SJ05668"

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(Created page with "Category:gene == Gene SJ07228 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-8025 ** Category:...")
(Created page with "Category:gene == Gene SJ06638 == * transcription-direction: ** positive * right-end-position: ** 70959 * left-end-position: ** 47038 * centisome-position: ** 61.245007...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07228 ==
+
== Gene SJ06638 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 70959
 +
* left-end-position:
 +
** 47038
 +
* centisome-position:
 +
** 61.245007   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-8025]]
+
* [[3.2.1.39-RXN]]
−
** Category: [[manual]]
 
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
−
* [[RXN-8026]]
 
−
** Category: [[manual]]
 
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
−
* [[RXN1F-152]]
 
−
** Category: [[manual]]
 
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
−
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
== Pathway(s) associated ==
+
* [[3.2.1.6-RXN]]
−
* [[PWY-7638]]
+
** Category: [[annotation]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PWY-5944]]
+
** Category: [[orthology]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PWY-5288]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
{{#set: right-end-position=70959}}
 +
{{#set: left-end-position=47038}}
 +
{{#set: centisome-position=61.245007    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=3}}
 

Revision as of 08:20, 15 March 2021

Gene SJ06638

  • transcription-direction:
    • positive
  • right-end-position:
    • 70959
  • left-end-position:
    • 47038
  • centisome-position:
    • 61.245007

Organism(s) associated with this gene

Reaction(s) associated




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