Difference between revisions of "SJ05669"

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(Created page with "Category:gene == Gene SJ06894 == * transcription-direction: ** negative * right-end-position: ** 119022 * left-end-position: ** 110310 * centisome-position: ** 23.53968...")
(Created page with "Category:gene == Gene SJ17355 == * transcription-direction: ** positive * right-end-position: ** 88502 * left-end-position: ** 80902 * centisome-position: ** 30.739944...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06894 ==
+
== Gene SJ17355 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 119022
+
** 88502
 
* left-end-position:
 
* left-end-position:
−
** 110310
+
** 80902
 
* centisome-position:
 
* centisome-position:
−
** 23.53968    
+
** 30.739944    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[3.6.4.5-RXN]]
+
* [[GDR]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[ATPASE-RXN]]
+
* [[GDR_LPAREN_nadp_RPAREN_]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[GDR_LPAREN_nadp_RPAREN_h]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[GDR_LPAREN_nadp_RPAREN_m]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12195]]
+
* [[GDRh]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12196]]
+
* [[GDRm]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[GLUTATHIONE-REDUCT-NADPH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-4081]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[GLUT-REDOX-PWY]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7184]]
+
{{#set: transcription-direction=positive}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=88502}}
−
* [[PWY-6545]]
+
{{#set: left-end-position=80902}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=30.739944   }}
−
{{#set: transcription-direction=negative}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: right-end-position=119022}}
+
{{#set: nb reaction associated=7}}
−
{{#set: left-end-position=110310}}
+
{{#set: nb pathway associated=2}}
−
{{#set: centisome-position=23.53968   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=6}}
 
−
{{#set: nb pathway associated=4}}
 

Revision as of 20:25, 18 December 2020

Gene SJ17355

  • transcription-direction:
    • positive
  • right-end-position:
    • 88502
  • left-end-position:
    • 80902
  • centisome-position:
    • 30.739944

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4081
    • 3 reactions found over 3 reactions in the full pathway
  • GLUT-REDOX-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05669&oldid=43620"