Difference between revisions of "SJ05670"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ02922 == * transcription-direction: ** positive * right-end-position: ** 441590 * left-end-position: ** 430736 * centisome-position: ** 81.104294...")
(Created page with "Category:gene == Gene SJ07056 == * transcription-direction: ** negative * right-end-position: ** 58834 * left-end-position: ** 52308 * centisome-position: ** 73.3324 =...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02922 ==
+
== Gene SJ07056 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 441590
+
** 58834
 
* left-end-position:
 
* left-end-position:
−
** 430736
+
** 52308
 
* centisome-position:
 
* centisome-position:
−
** 81.104294    
+
** 73.3324    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.5.1.15-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DIHYDROFOLATEREDUCT-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
+
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[MTHFD2]]
+
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[MTHFD2i]]
+
* [[RXN-8635]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-2201]]
+
* [[PWY-7214]]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[1CMET2-PWY]]
+
* [[PWY-7445]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-3841]]
+
* [[PWY-5466]]
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6614]]
+
* [[PWY-6824]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5497]]
+
* [[PWY-5469]]
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[CODH-PWY]]
+
* [[PWY-5461]]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7909]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=58834}}
−
* [[PWY-1722]]
+
{{#set: left-end-position=52308}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=73.3324   }}
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=441590}}
 
−
{{#set: left-end-position=430736}}
 
−
{{#set: centisome-position=81.104294   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=6}}

Revision as of 08:20, 15 March 2021

Gene SJ07056

  • transcription-direction:
    • negative
  • right-end-position:
    • 58834
  • left-end-position:
    • 52308
  • centisome-position:
    • 73.3324

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05670&oldid=122030"