Difference between revisions of "SJ05696"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHTYOSPHINGOSINE-1-P PHTYOSPHINGOSINE-1-P] == * common-name: ** phytosphingosine 1-phosphate *...")
(Created page with "Category:gene == Gene SJ15413 == * transcription-direction: ** positive * right-end-position: ** 282221 * left-end-position: ** 274065 * centisome-position: ** 92.47580...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHTYOSPHINGOSINE-1-P PHTYOSPHINGOSINE-1-P] ==
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== Gene SJ15413 ==
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* common-name:
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* transcription-direction:
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** phytosphingosine 1-phosphate
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** positive
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* smiles:
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* right-end-position:
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** ccccccccccccccc(o)c(c(cop([o-])(=o)[o-])[n+])o
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** 282221
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* inchi-key:
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* left-end-position:
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** aygoskultisfcw-kszliroesa-m
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** 274065
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* molecular-weight:
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* centisome-position:
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** 396.483
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** 92.47580   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-13729]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN3O-458]]
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=phytosphingosine 1-phosphate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=aygoskultisfcw-kszliroesa-m}}
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** Category: [[orthology]]
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{{#set: molecular-weight=396.483}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7159]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[CHLOROPHYLL-SYN]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5531]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=282221}}
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{{#set: left-end-position=274065}}
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{{#set: centisome-position=92.47580    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=3}}

Revision as of 20:19, 18 December 2020

Gene SJ15413

  • transcription-direction:
    • positive
  • right-end-position:
    • 282221
  • left-end-position:
    • 274065
  • centisome-position:
    • 92.47580

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7159
    • 5 reactions found over 9 reactions in the full pathway
  • CHLOROPHYLL-SYN
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-5531
    • 4 reactions found over 9 reactions in the full pathway




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