Difference between revisions of "SJ05770"

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(Created page with "Category:gene == Gene SJ02922 == * transcription-direction: ** positive * right-end-position: ** 441590 * left-end-position: ** 430736 * centisome-position: ** 81.104294...")
(Created page with "Category:gene == Gene SJ22039 == * transcription-direction: ** negative * right-end-position: ** 61145 * left-end-position: ** 32824 * centisome-position: ** 18.061861...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02922 ==
+
== Gene SJ22039 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 441590
+
** 61145
 
* left-end-position:
 
* left-end-position:
−
** 430736
+
** 32824
 
* centisome-position:
 
* centisome-position:
−
** 81.104294    
+
** 18.061861    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.5.1.15-RXN]]
+
* [[2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DIHYDROFOLATEREDUCT-RXN]]
+
* [[RXN-969]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
+
* [[S-2-HYDROXY-ACID-OXIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[MTHFD2]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[MTHFD2i]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-2201]]
+
* [[PWY-181]]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[1CMET2-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=61145}}
−
* [[PWY-3841]]
+
{{#set: left-end-position=32824}}
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
{{#set: centisome-position=18.061861   }}
−
* [[PWY-6614]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5497]]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[CODH-PWY]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7909]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-1722]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=441590}}
 
−
{{#set: left-end-position=430736}}
 
−
{{#set: centisome-position=81.104294   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=1}}

Revision as of 13:04, 14 January 2021

Gene SJ22039

  • transcription-direction:
    • negative
  • right-end-position:
    • 61145
  • left-end-position:
    • 32824
  • centisome-position:
    • 18.061861

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-181
    • 5 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05770&oldid=82944"