Difference between revisions of "SJ05770"

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(Created page with "Category:gene == Gene SJ04992 == * transcription-direction: ** positive * right-end-position: ** 801930 * left-end-position: ** 796744 * centisome-position: ** 82.50993...")
(Created page with "Category:gene == Gene SJ05770 == * transcription-direction: ** positive * right-end-position: ** 197949 * left-end-position: ** 180522 * centisome-position: ** 37.026737...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04992 ==
+
== Gene SJ05770 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 801930
+
** 197949
 
* left-end-position:
 
* left-end-position:
−
** 796744
+
** 180522
 
* centisome-position:
 
* centisome-position:
−
** 82.50993    
+
** 37.026737    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.11.2-RXN]]
+
* [[FUMHYDR-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[3.1.4.1-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[4.2.99.18-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-2601]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-5690]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[P108-PWY]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[P105-PWY]]
 +
** '''10''' reactions found over '''9''' reactions in the full pathway
 +
* [[TCA]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[REDCITCYC]]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[P42-PWY]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-398]]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7254]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6969]]
 +
** '''10''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5913]]
 +
** '''10''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-561]]
 +
** '''6''' reactions found over '''4''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]]
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 +
* [[P23-PWY]]
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7384]]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-5392]]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=801930}}
+
{{#set: right-end-position=197949}}
−
{{#set: left-end-position=796744}}
+
{{#set: left-end-position=180522}}
−
{{#set: centisome-position=82.50993   }}
+
{{#set: centisome-position=37.026737   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=16}}

Latest revision as of 11:07, 18 March 2021

Gene SJ05770

  • transcription-direction:
    • positive
  • right-end-position:
    • 197949
  • left-end-position:
    • 180522
  • centisome-position:
    • 37.026737

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway
  • P108-PWY
    • 2 reactions found over 7 reactions in the full pathway
  • P105-PWY
    • 10 reactions found over 9 reactions in the full pathway
  • TCA
    • 9 reactions found over 10 reactions in the full pathway
  • REDCITCYC
    • 5 reactions found over 9 reactions in the full pathway
  • P42-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-7254
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-6969
    • 10 reactions found over 9 reactions in the full pathway
  • PWY-5913
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-561
    • 6 reactions found over 4 reactions in the full pathway
  • FERMENTATION-PWY
    • 11 reactions found over 16 reactions in the full pathway
  • P23-PWY
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • PWY-5392
    • 6 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05770&oldid=135045"