Difference between revisions of "SJ05779"

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(Created page with "Category:gene == Gene SJ22196 == * transcription-direction: ** positive * right-end-position: ** 23647 * left-end-position: ** 17291 * centisome-position: ** 9.631957...")
(Created page with "Category:gene == Gene SJ15785 == * transcription-direction: ** negative * right-end-position: ** 1091220 * left-end-position: ** 1080369 * centisome-position: ** 88.74141...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22196 ==
+
== Gene SJ15785 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 23647
+
** 1091220
 
* left-end-position:
 
* left-end-position:
−
** 17291
+
** 1080369
 
* centisome-position:
 
* centisome-position:
−
** 9.631957    
+
** 88.74141    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[ERYTHRULOSE-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[L-XYLULOSE-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12195]]
+
* [[RXN-17773]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9524]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9528]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9536]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6545]]
+
* [[PWY-7786]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-5525]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-5515]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-5994]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5971]]
−
{{#set: right-end-position=23647}}
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
{{#set: left-end-position=17291}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=9.631957   }}
+
{{#set: right-end-position=1091220}}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: left-end-position=1080369}}
−
{{#set: nb reaction associated=5}}
+
{{#set: centisome-position=88.74141   }}
−
{{#set: nb pathway associated=4}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=5}}

Revision as of 14:49, 5 January 2021

Gene SJ15785

  • transcription-direction:
    • negative
  • right-end-position:
    • 1091220
  • left-end-position:
    • 1080369
  • centisome-position:
    • 88.74141

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7786
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5515
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5994
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5971
    • 31 reactions found over 31 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05779&oldid=56685"