Difference between revisions of "SJ05785"

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(Created page with "Category:gene == Gene SJ11355 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
(Created page with "Category:gene == Gene SJ05785 == * transcription-direction: ** negative * right-end-position: ** 437195 * left-end-position: ** 421902 * centisome-position: ** 86.53601...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11355 ==
+
== Gene SJ05785 ==
 +
* transcription-direction:
 +
** negative
 +
* right-end-position:
 +
** 437195
 +
* left-end-position:
 +
** 421902
 +
* centisome-position:
 +
** 86.53601   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN]]
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* [[1.14.13.78-RXN]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-1121]]
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* [[RXN-17203]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12510]]
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* [[RXN-18301]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-3661]]
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* [[RXN-18303]]
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** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-5242]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7580]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7651]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5047]]
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* [[PWY-7840]]
−
** '''6''' reactions found over '''15''' reactions in the full pathway
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** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5034]]
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{{#set: transcription-direction=negative}}
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=437195}}
−
* [[PWY-2181]]
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{{#set: left-end-position=421902}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=86.53601    }}
−
* [[PWY-3101]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5640]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5060]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY1F-467]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-1121]]
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:04, 18 March 2021

Gene SJ05785

  • transcription-direction:
    • negative
  • right-end-position:
    • 437195
  • left-end-position:
    • 421902
  • centisome-position:
    • 86.53601

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7840
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05785&oldid=133549"