Difference between revisions of "SJ05785"
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(Created page with "Category:gene == Gene SJ17742 == * transcription-direction: ** negative * right-end-position: ** 125197 * left-end-position: ** 102887 * centisome-position: ** 40.13865...") |
(Created page with "Category:gene == Gene SJ05457 == * transcription-direction: ** negative * right-end-position: ** 23808 * left-end-position: ** 5078 * centisome-position: ** 5.5337 ==...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ05457 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 23808 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 5078 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 5.5337 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[HEMN-RXN]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN0-1461]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-5531]] | ||
| + | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[HEMESYN2-PWY]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY0-1415]] | ||
| + | ** '''5''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[CHLOROPHYLL-SYN]] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7159]] | ||
| + | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[HEME-BIOSYNTHESIS-II]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=23808}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=5078}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=5.5337 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| + | {{#set: nb pathway associated=6}} | ||
Revision as of 14:20, 26 August 2019
Contents
Gene SJ05457
- transcription-direction:
- negative
- right-end-position:
- 23808
- left-end-position:
- 5078
- centisome-position:
- 5.5337
Organism(s) associated with this gene
Reaction(s) associated
- HEMN-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN0-1461
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5531
- 4 reactions found over 9 reactions in the full pathway
- HEMESYN2-PWY
- 3 reactions found over 4 reactions in the full pathway
- PWY0-1415
- 5 reactions found over 4 reactions in the full pathway
- CHLOROPHYLL-SYN
- 6 reactions found over 9 reactions in the full pathway
- PWY-7159
- 5 reactions found over 9 reactions in the full pathway
- HEME-BIOSYNTHESIS-II
- 4 reactions found over 4 reactions in the full pathway
