Difference between revisions of "SJ05786"
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(Created page with "Category:gene == Gene SJ10690 == * transcription-direction: ** positive * right-end-position: ** 652240 * left-end-position: ** 646398 * centisome-position: ** 82.019585...") |
(Created page with "Category:gene == Gene SJ09463 == * transcription-direction: ** negative * right-end-position: ** 413302 * left-end-position: ** 403350 * centisome-position: ** 97.07815...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ09463 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 413302 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 403350 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 97.07815 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[CYCLOEUCALENOL-CYCLOISOMERASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | ** Category: [[orthology]] |
− | ** Category: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
− | *** source: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | {{#set: transcription-direction= | + | * [[RXN11876]] |
− | {{#set: right-end-position= | + | ** Category: [[manual]] |
− | {{#set: left-end-position= | + | *** source: [[reaction_creator_sjap]]; tool: [[unknown-tool]]; comment: curation sterols (girard et al.) |
− | {{#set: centisome-position= | + | == Pathway(s) associated == |
+ | * [[PWY-7155]] | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-2541]] | ||
+ | ** '''11''' reactions found over '''35''' reactions in the full pathway | ||
+ | * [[PWY-8191]] | ||
+ | ** '''15''' reactions found over '''n.a''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=413302}} | ||
+ | {{#set: left-end-position=403350}} | ||
+ | {{#set: centisome-position=97.07815 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=2}} | {{#set: nb reaction associated=2}} | ||
+ | {{#set: nb pathway associated=3}} |
Revision as of 18:50, 14 January 2021
Contents
Gene SJ09463
- transcription-direction:
- negative
- right-end-position:
- 413302
- left-end-position:
- 403350
- centisome-position:
- 97.07815
Organism(s) associated with this gene
Reaction(s) associated
- CYCLOEUCALENOL-CYCLOISOMERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN11876
- Category: manual
- source: reaction_creator_sjap; tool: unknown-tool; comment: curation sterols (girard et al.)
- Category: manual
Pathway(s) associated
- PWY-7155
- 4 reactions found over 6 reactions in the full pathway
- PWY-2541
- 11 reactions found over 35 reactions in the full pathway
- PWY-8191
- 15 reactions found over n.a reactions in the full pathway