Difference between revisions of "SJ05827"
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(Created page with "Category:gene == Gene SJ01075 == * transcription-direction: ** positive * right-end-position: ** 125819 * left-end-position: ** 121341 * centisome-position: ** 77.671165...") |
(Created page with "Category:gene == Gene SJ05827 == * transcription-direction: ** positive * right-end-position: ** 320988 * left-end-position: ** 286400 * centisome-position: ** 58.91719...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ05827 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 320988 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 286400 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 58.91719 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[N-ACETYLTRANSFER-RXN]] | |
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[RXN0-6948]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
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== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5154]] |
| − | ** ''' | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
| − | * [[ | + | * [[ARGSYNBSUB-PWY]] |
| − | + | ** '''9''' reactions found over '''9''' reactions in the full pathway | |
| − | + | * [[GLUTORN-PWY]] | |
| − | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
| − | * [[ | ||
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| − | ** ''' | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=320988}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=286400}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=58.91719 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ05827
- transcription-direction:
- positive
- right-end-position:
- 320988
- left-end-position:
- 286400
- centisome-position:
- 58.91719
Organism(s) associated with this gene
Reaction(s) associated
- N-ACETYLTRANSFER-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-6948
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5154
- 8 reactions found over 9 reactions in the full pathway
- ARGSYNBSUB-PWY
- 9 reactions found over 9 reactions in the full pathway
- GLUTORN-PWY
- 5 reactions found over 5 reactions in the full pathway
