Difference between revisions of "SJ05836"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15837 CPD-15837] == * common-name: ** β-tocotrienol * smiles: ** cc(=cccc(=cccc(=cccc1...")
(Created page with "Category:gene == Gene SJ10400 == * transcription-direction: ** negative * right-end-position: ** 8152 * left-end-position: ** 1899 * centisome-position: ** 6.221538 ==...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15837 CPD-15837] ==
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== Gene SJ10400 ==
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* common-name:
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* transcription-direction:
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** β-tocotrienol
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** negative
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* smiles:
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* right-end-position:
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** cc(=cccc(=cccc(=cccc1(c)(oc2(c(cc1)=c(c(=cc=2c)o)c)))c)c)c
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** 8152
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* inchi-key:
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* left-end-position:
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** fgykufvnyvmtam-wazjvijmsa-n
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** 1899
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* molecular-weight:
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* centisome-position:
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** 410.639
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** 6.221538   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-14919]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=&beta;-tocotrienol}}
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* [[1.1.1.145-RXN]]
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{{#set: inchi-key=inchikey=fgykufvnyvmtam-wazjvijmsa-n}}
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** Category: [[annotation]]
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{{#set: molecular-weight=410.639}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12693]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12747]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12789]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-342]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-350]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-353]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6946]]
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** '''6''' reactions found over '''22''' reactions in the full pathway
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* [[PWY-6944]]
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** '''2''' reactions found over '''25''' reactions in the full pathway
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* [[PWY-6948]]
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** '''2''' reactions found over '''18''' reactions in the full pathway
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* [[PWY66-378]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7299]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-4861]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6415]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=8152}}
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{{#set: left-end-position=1899}}
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{{#set: centisome-position=6.221538    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=8}}
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{{#set: nb pathway associated=7}}

Revision as of 09:25, 27 August 2019

Gene SJ10400

  • transcription-direction:
    • negative
  • right-end-position:
    • 8152
  • left-end-position:
    • 1899
  • centisome-position:
    • 6.221538

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7299
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4861
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6415
    • 4 reactions found over 7 reactions in the full pathway




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