Difference between revisions of "SJ05850"

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(Created page with "Category:gene == Gene SJ06122 == * transcription-direction: ** negative * right-end-position: ** 37802 * left-end-position: ** 12832 * centisome-position: ** 15.349648...")
(Created page with "Category:gene == Gene SJ05850 == * transcription-direction: ** positive * right-end-position: ** 33296 * left-end-position: ** 22905 * centisome-position: ** 26.291624...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06122 ==
+
== Gene SJ05850 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 37802
+
** 33296
 
* left-end-position:
 
* left-end-position:
−
** 12832
+
** 22905
 
* centisome-position:
 
* centisome-position:
−
** 15.349648    
+
** 26.291624    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.5.1.19-RXN]]
+
* [[2.7.7.64-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GLUC1PURIDYLTRANS-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UTPHEXPURIDYLYLTRANS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6163]]
+
* [[PWY-7817]]
−
** '''6''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''16''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7238]]
−
{{#set: right-end-position=37802}}
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
{{#set: left-end-position=12832}}
+
* [[PWY-6527]]
−
{{#set: centisome-position=15.349648   }}
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-3801]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7343]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-3821]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=33296}}
 +
{{#set: left-end-position=22905}}
 +
{{#set: centisome-position=26.291624   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:06, 18 March 2021

Gene SJ05850

  • transcription-direction:
    • positive
  • right-end-position:
    • 33296
  • left-end-position:
    • 22905
  • centisome-position:
    • 26.291624

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7817
    • 6 reactions found over 16 reactions in the full pathway
  • PWY-7238
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-6527
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-3801
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7343
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-3821
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05850&oldid=134428"