Difference between revisions of "SJ05871"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8081 CPD-8081] == * common-name: ** 1-18:3-2-18:3-digalactosyldiacylglycerol * smiles: ** c...")
 
(Created page with "Category:gene == Gene SJ05871 == * transcription-direction: ** negative * right-end-position: ** 23114 * left-end-position: ** 21562 * centisome-position: ** 24.839869...")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8081 CPD-8081] ==
+
== Gene SJ05871 ==
−
* common-name:
+
* transcription-direction:
−
** 1-18:3-2-18:3-digalactosyldiacylglycerol
+
** negative
−
* smiles:
+
* right-end-position:
−
** ccc=ccc=ccc=ccccccccc(occ(coc2(oc(coc1(oc(co)c(o)c(o)c(o)1))c(o)c(o)c(o)2))oc(=o)cccccccc=ccc=ccc=ccc)=o
+
** 23114
−
* inchi-key:
+
* left-end-position:
−
** kdyapqvyjxuqny-ncuixijtsa-n
+
** 21562
−
* molecular-weight:
+
* centisome-position:
−
** 937.216
+
** 24.839869   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
== Reaction(s) known to produce the compound ==
+
* [[S.japonica_carotenoid_curated]]
−
* [[RXN-8311]]
+
== Reaction(s) associated ==
−
* [[RXN-8314]]
+
* [[ATPASE-RXN]]
−
== Reaction(s) of unknown directionality ==
+
** Category: [[annotation]]
−
{{#set: common-name=1-18:3-2-18:3-digalactosyldiacylglycerol}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: inchi-key=inchikey=kdyapqvyjxuqny-ncuixijtsa-n}}
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
{{#set: molecular-weight=937.216}}
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11135]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=23114}}
 +
{{#set: left-end-position=21562}}
 +
{{#set: centisome-position=24.839869    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:00, 18 March 2021

Gene SJ05871

  • transcription-direction:
    • negative
  • right-end-position:
    • 23114
  • left-end-position:
    • 21562
  • centisome-position:
    • 24.839869

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05871&oldid=131617"