Difference between revisions of "SJ05887"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LAUROYLCOA-CPD LAUROYLCOA-CPD] == * common-name: ** lauroyl-coa * smiles: ** cccccccccccc(=o)sc...")
(Created page with "Category:gene == Gene SJ05887 == * transcription-direction: ** negative * right-end-position: ** 358544 * left-end-position: ** 289491 * centisome-position: ** 59.739613...")
 
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=LAUROYLCOA-CPD LAUROYLCOA-CPD] ==
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== Gene SJ05887 ==
* common-name:
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* transcription-direction:
** lauroyl-coa
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** negative
* smiles:
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* right-end-position:
** cccccccccccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 358544
* inchi-key:
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* left-end-position:
** ymcxghlsvalicc-gmhmeamdsa-j
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** 289491
* molecular-weight:
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* centisome-position:
** 945.808
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** 59.739613   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[ACACT6]]
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* [[S.japonica_carotenoid_curated]]
* [[ACACT6h]]
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== Reaction(s) associated ==
* [[ACOA120OR]]
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* [[PROTEIN-KINASE-RXN]]
* [[RXN-14262]]
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** Category: [[annotation]]
* [[RXN-9627]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
* [[ACACT6]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-14262]]
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* [[RXN-8443]]
* [[RXN-14268]]
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** Category: [[orthology]]
* [[RXN-16393]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
== Reaction(s) of unknown directionality ==
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
{{#set: common-name=lauroyl-coa}}
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* [[TAU-PROTEIN-KINASE-RXN]]
{{#set: inchi-key=inchikey=ymcxghlsvalicc-gmhmeamdsa-j}}
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** Category: [[annotation]]
{{#set: molecular-weight=945.808}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-5381]]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=358544}}
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{{#set: left-end-position=289491}}
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{{#set: centisome-position=59.739613    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=1}}

Latest revision as of 11:01, 18 March 2021

Gene SJ05887

  • transcription-direction:
    • negative
  • right-end-position:
    • 358544
  • left-end-position:
    • 289491
  • centisome-position:
    • 59.739613

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway