Difference between revisions of "SJ05887"
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(Created page with "Category:gene == Gene SJ20281 == * transcription-direction: ** negative * right-end-position: ** 41796 * left-end-position: ** 33801 * centisome-position: ** 16.146307...") |
(Created page with "Category:gene == Gene SJ05887 == * transcription-direction: ** negative * right-end-position: ** 358544 * left-end-position: ** 289491 * centisome-position: ** 59.739613...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ05887 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 358544 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 289491 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 59.739613 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
| Line 15: | Line 15: | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-8443]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[TAU-PROTEIN-KINASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-5381]] | ||
| + | ** '''6''' reactions found over '''11''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=358544}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=289491}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=59.739613 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated=1}} | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=1}} | ||
Latest revision as of 11:01, 18 March 2021
Contents
Gene SJ05887
- transcription-direction:
- negative
- right-end-position:
- 358544
- left-end-position:
- 289491
- centisome-position:
- 59.739613
Organism(s) associated with this gene
Reaction(s) associated
- PROTEIN-KINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-8443
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- TAU-PROTEIN-KINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5381
- 6 reactions found over 11 reactions in the full pathway
