Difference between revisions of "SJ05909"

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(Created page with "Category:gene == Gene SJ18979 == * transcription-direction: ** negative * right-end-position: ** 187691 * left-end-position: ** 179025 * centisome-position: ** 76.74682...")
(Created page with "Category:gene == Gene SJ05909 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * SHIKIMATE-KINASE-RXN *...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ18979 ==
+
== Gene SJ05909 ==
* transcription-direction:
 
** negative
 
* right-end-position:
 
** 187691
 
* left-end-position:
 
** 179025
 
* centisome-position:
 
** 76.74682   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[SHIKIMATE-KINASE-RXN]]
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-10949]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10952]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-10953]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10954]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-7253]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN0-5408]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXNQT-4142]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[SUGAR-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-2301]]
+
* [[PWY-6163]]
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6363]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-4702]]
 
** '''3''' reactions found over '''14''' reactions in the full pathway
 
* [[PWY-882]]
 
** '''6''' reactions found over '''8''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=187691}}
 
{{#set: left-end-position=179025}}
 
{{#set: centisome-position=76.74682    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:08, 18 March 2021

Gene SJ05909

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6163
    • 6 reactions found over 5 reactions in the full pathway