Difference between revisions of "SJ05909"
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(Created page with "Category:gene == Gene SJ14140 == * transcription-direction: ** positive * right-end-position: ** 279254 * left-end-position: ** 278373 * centisome-position: ** 85.937485...") |
(Created page with "Category:gene == Gene SJ18265 == * transcription-direction: ** negative * right-end-position: ** 195113 * left-end-position: ** 190858 * centisome-position: ** 76.68521...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ18265 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 195113 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 190858 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 76.68521 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_sterols_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[TRANSALDOL-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: organism associated=S. | + | == Pathway(s) associated == |
| + | * [[PWY-1861]] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[P124-PWY]] | ||
| + | ** '''12''' reactions found over '''15''' reactions in the full pathway | ||
| + | * [[P185-PWY]] | ||
| + | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[NONOXIPENT-PWY]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-5723]] | ||
| + | ** '''10''' reactions found over '''10''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=195113}} | ||
| + | {{#set: left-end-position=190858}} | ||
| + | {{#set: centisome-position=76.68521 }} | ||
| + | {{#set: organism associated=S.japonica_sterols_curated}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| + | {{#set: nb pathway associated=5}} | ||
Revision as of 20:27, 18 December 2020
Contents
Gene SJ18265
- transcription-direction:
- negative
- right-end-position:
- 195113
- left-end-position:
- 190858
- centisome-position:
- 76.68521
Organism(s) associated with this gene
Reaction(s) associated
- TRANSALDOL-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-1861
- 7 reactions found over 9 reactions in the full pathway
- P124-PWY
- 12 reactions found over 15 reactions in the full pathway
- P185-PWY
- 11 reactions found over 12 reactions in the full pathway
- NONOXIPENT-PWY
- 5 reactions found over 5 reactions in the full pathway
- PWY-5723
- 10 reactions found over 10 reactions in the full pathway
