Difference between revisions of "SJ06042"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPDQT-4 CPDQT-4] == * common-name: ** β-l-galactose 1-phosphate * smiles: ** c(o)c1(c(o)c(...")
(Created page with "Category:gene == Gene SJ10617 == * transcription-direction: ** positive * right-end-position: ** 270840 * left-end-position: ** 254884 * centisome-position: ** 65.84159...")
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPDQT-4 CPDQT-4] ==
+
== Gene SJ10617 ==
−
* common-name:
+
* transcription-direction:
−
** β-l-galactose 1-phosphate
+
** positive
−
* smiles:
+
* right-end-position:
−
** c(o)c1(c(o)c(o)c(o)c(op([o-])([o-])=o)o1)
+
** 270840
−
* inchi-key:
+
* left-end-position:
−
** hxxfsfrbohsimq-sxuwkvjysa-l
+
** 254884
−
* molecular-weight:
+
* centisome-position:
−
** 258.121
+
** 65.84159   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[RXNQT-4142]]
+
* [[S.japonica_sterols_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
* [[RXN4FS-12]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[RXN4FS-13]]
+
* [[3.1.3.74-RXN]]
−
* [[RXNQT-4141]]
+
** Category: [[orthology]]
−
== Reaction(s) of unknown directionality ==
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
{{#set: common-name=&beta;-l-galactose 1-phosphate}}
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
{{#set: inchi-key=inchikey=hxxfsfrbohsimq-sxuwkvjysa-l}}
+
** Category: [[annotation]]
−
{{#set: molecular-weight=258.121}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[GPH-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PYAMPP]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14181]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-7204]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-181]]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=270840}}
 +
{{#set: left-end-position=254884}}
 +
{{#set: centisome-position=65.84159    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=2}}

Revision as of 20:21, 18 December 2020

Gene SJ10617

  • transcription-direction:
    • positive
  • right-end-position:
    • 270840
  • left-end-position:
    • 254884
  • centisome-position:
    • 65.84159

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7204
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-181
    • 5 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06042&oldid=41617"