Difference between revisions of "SJ06087"
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(Created page with "Category:gene == Gene SJ01775 == * transcription-direction: ** positive * right-end-position: ** 80114 * left-end-position: ** 46089 * centisome-position: ** 31.588146...") |
(Created page with "Category:gene == Gene SJ05001 == * transcription-direction: ** negative * right-end-position: ** 124254 * left-end-position: ** 116058 * centisome-position: ** 12.018839...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ05001 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 124254 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 116058 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 12.018839 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[GTP-CYCLOHYDRO-II-RXN]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[RIBOSYN2-PWY]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** '''8''' reactions found over '''9''' reactions in the full pathway | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| − | {{#set: transcription-direction= | + | * [[PWY-7539]] |
| − | {{#set: right-end-position= | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-6168]] |
| − | {{#set: centisome-position= | + | ** '''7''' reactions found over '''9''' reactions in the full pathway |
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=124254}} | ||
| + | {{#set: left-end-position=116058}} | ||
| + | {{#set: centisome-position=12.018839 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 11:09, 15 January 2021
Contents
Gene SJ05001
- transcription-direction:
- negative
- right-end-position:
- 124254
- left-end-position:
- 116058
- centisome-position:
- 12.018839
Organism(s) associated with this gene
Reaction(s) associated
- GTP-CYCLOHYDRO-II-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- RIBOSYN2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-7539
- 4 reactions found over 5 reactions in the full pathway
- PWY-6168
- 7 reactions found over 9 reactions in the full pathway
