Difference between revisions of "SJ06116"

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(Created page with "Category:gene == Gene SJ18020 == * transcription-direction: ** positive * right-end-position: ** 185208 * left-end-position: ** 163861 * centisome-position: ** 63.923557...")
(Created page with "Category:gene == Gene SJ06116 == * transcription-direction: ** negative * right-end-position: ** 446045 * left-end-position: ** 439197 * centisome-position: ** 91.26020...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18020 ==
+
== Gene SJ06116 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 185208
+
** 446045
 
* left-end-position:
 
* left-end-position:
−
** 163861
+
** 439197
 
* centisome-position:
 
* centisome-position:
−
** 63.923557    
+
** 91.26020    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PHOSGLYPHOS-RXN]]
+
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6545]]
−
* [[PWY66-399]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-7210]]
−
* [[GLUCONEO-PWY]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[P124-PWY]]
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[CALVIN-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[P185-PWY]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
−
</div>
+
* [[PWY-7184]]
−
{{#set: transcription-direction=positive}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: right-end-position=185208}}
+
{{#set: transcription-direction=negative}}
−
{{#set: left-end-position=163861}}
+
{{#set: right-end-position=446045}}
−
{{#set: centisome-position=63.923557   }}
+
{{#set: left-end-position=439197}}
 +
{{#set: centisome-position=91.26020   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:08, 18 March 2021

Gene SJ06116

  • transcription-direction:
    • negative
  • right-end-position:
    • 446045
  • left-end-position:
    • 439197
  • centisome-position:
    • 91.26020

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06116&oldid=135581"