Difference between revisions of "SJ06201"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17313 CPD-17313] == * common-name: ** sapienoyl-coa * smiles: ** cccccccccc=cccccc(sccnc(=o...")
(Created page with "Category:gene == Gene SJ19894 == * transcription-direction: ** negative * right-end-position: ** 88529 * left-end-position: ** 57572 * centisome-position: ** 26.443747...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17313 CPD-17313] ==
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== Gene SJ19894 ==
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* common-name:
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* transcription-direction:
−
** sapienoyl-coa
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** negative
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* smiles:
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* right-end-position:
−
** cccccccccc=cccccc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
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** 88529
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* inchi-key:
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* left-end-position:
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** pvzuhjmomjkuef-hatlacbzsa-j
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** 57572
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* molecular-weight:
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* centisome-position:
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** 999.899
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** 26.443747   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-16065]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=sapienoyl-coa}}
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* [[DCTP-PYROPHOSPHATASE-RXN]]
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{{#set: inchi-key=inchikey=pvzuhjmomjkuef-hatlacbzsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=999.899}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[DGTD]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DUTNH]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[DUTP-PYROP-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[ITPP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[NTDP]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[NTPD]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14139]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14140]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-1602]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-1603]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-383]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-384]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-385]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-4401]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5107]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-6382]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[UTPPH]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-7206]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7187]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY0-166]]
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** '''14''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7821]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
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{{#set: right-end-position=88529}}
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{{#set: left-end-position=57572}}
 +
{{#set: centisome-position=26.443747    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=19}}
 +
{{#set: nb pathway associated=6}}

Revision as of 09:25, 27 August 2019

Gene SJ19894

  • transcription-direction:
    • negative
  • right-end-position:
    • 88529
  • left-end-position:
    • 57572
  • centisome-position:
    • 26.443747

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7206
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7187
    • 6 reactions found over 7 reactions in the full pathway
  • PWY0-166
    • 14 reactions found over 13 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7821
    • 2 reactions found over 9 reactions in the full pathway




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