Difference between revisions of "SJ06217"

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(Created page with "Category:gene == Gene SJ00780 == * transcription-direction: ** positive * right-end-position: ** 42185 * left-end-position: ** 15261 * centisome-position: ** 9.450237...")
(Created page with "Category:gene == Gene SJ20499 == * transcription-direction: ** positive * right-end-position: ** 124407 * left-end-position: ** 118532 * centisome-position: ** 19.179222...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00780 ==
+
== Gene SJ20499 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 42185
+
** 124407
 
* left-end-position:
 
* left-end-position:
** 15261
+
** 118532
 
* centisome-position:
 
* centisome-position:
** 9.450237    
+
** 19.179222    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[1.2.1.18-RXN]]
+
* [[RXN-11834]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[1.2.1.27-RXN]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-11213]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-2902]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-9958]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-5642]]
 
** '''1''' reactions found over '''7''' reactions in the full pathway
 
* [[VALDEG-PWY]]
 
** '''6''' reactions found over '''8''' reactions in the full pathway
 
* [[BETA-ALA-DEGRADATION-I-PWY]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7574]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
* [[P562-PWY]]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-1781]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6373]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=42185}}
+
{{#set: right-end-position=124407}}
{{#set: left-end-position=15261}}
+
{{#set: left-end-position=118532}}
{{#set: centisome-position=9.450237   }}
+
{{#set: centisome-position=19.179222   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=7}}
 

Revision as of 08:19, 15 March 2021

Gene SJ20499

  • transcription-direction:
    • positive
  • right-end-position:
    • 124407
  • left-end-position:
    • 118532
  • centisome-position:
    • 19.179222

Organism(s) associated with this gene

Reaction(s) associated