Difference between revisions of "SJ06217"

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(Created page with "Category:gene == Gene SJ16261 == * transcription-direction: ** negative * right-end-position: ** 138644 * left-end-position: ** 125989 * centisome-position: ** 18.268806...")
(Created page with "Category:gene == Gene SJ06217 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-4726 ** Category:...")
 
(3 intermediate revisions by 3 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16261 ==
+
== Gene SJ06217 ==
−
* transcription-direction:
 
−
** negative
 
−
* right-end-position:
 
−
** 138644
 
−
* left-end-position:
 
−
** 125989
 
−
* centisome-position:
 
−
** 18.268806   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-4726]]
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* [[DIACYLGLYKIN-RXN]]
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** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-4733]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7828]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8228]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN1F-461]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NAD-KIN-RXN]]
+
* [[RXN1F-462]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11376]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN3DJ-11417]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN3O-458]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[SPHINGANINE-KINASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-7039]]
+
* [[PWY-2902]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7817]]
+
* [[PWY-2881]]
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY-1]]
+
* [[PWY-5268]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7269]]
+
* [[PWY-5139]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7268]]
+
* [[PWY-5307]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY]]
+
* [[PWY-7168]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5083]]
+
* [[PWY-7143]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6483]]
+
* [[PWY-5348]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5320]]
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7173]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY3DJ-11470]]
+
* [[PWY-7172]]
−
** '''3''' reactions found over '''10''' reactions in the full pathway
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** '''1''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7119]]
+
* [[PWY-7137]]
−
** '''4''' reactions found over '''16''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5129]]
+
* [[PWY-7129]]
−
** '''4''' reactions found over '''13''' reactions in the full pathway
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** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5390]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5321]]
 +
** '''1''' reactions found over '''12''' reactions in the full pathway
 
</div>
 
</div>
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=138644}}
 
−
{{#set: left-end-position=125989}}
 
−
{{#set: centisome-position=18.268806    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=6}}
 
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=15}}

Latest revision as of 11:06, 18 March 2021

Gene SJ06217

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2902
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-2881
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5268
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5139
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5307
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7168
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7143
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5348
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5320
    • 1 reactions found over 11 reactions in the full pathway
  • PWY-7173
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7172
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7137
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7129
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5390
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5321
    • 1 reactions found over 12 reactions in the full pathway


Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06217&oldid=134515"