Difference between revisions of "SJ06255"

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(Created page with "Category:gene == Gene SJ06255 == * transcription-direction: ** positive * right-end-position: ** 223969 * left-end-position: ** 210635 * centisome-position: ** 43.95656...")
(Created page with "Category:gene == Gene SJ17372 == * transcription-direction: ** negative * right-end-position: ** 58333 * left-end-position: ** 38478 * centisome-position: ** 14.6283045...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06255 ==
+
== Gene SJ17372 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 223969
+
** 58333
 
* left-end-position:
 
* left-end-position:
−
** 210635
+
** 38478
 
* centisome-position:
 
* centisome-position:
−
** 43.95656    
+
** 14.6283045    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.5.1.58-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GPPSYN-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17573]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15288]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-3701]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17352]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8635]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7214]]
−
* [[PWY-6383]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7445]]
−
* [[PWY-7410]]
 
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7102]]
+
* [[PWY-5466]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6859]]
+
* [[PWY-6824]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7736]]
+
* [[PWY-5469]]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5122]]
+
* [[PWY-5461]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7141]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: right-end-position=58333}}
−
* [[PWY-7659]]
+
{{#set: left-end-position=38478}}
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=14.6283045   }}
−
* [[PWY-7709]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: nb reaction associated=5}}
−
* [[PWY-5123]]
+
{{#set: nb pathway associated=6}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7182]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=223969}}
 
−
{{#set: left-end-position=210635}}
 
−
{{#set: centisome-position=43.95656   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=4}}
 
−
{{#set: nb pathway associated=11}}
 

Revision as of 14:45, 5 January 2021

Gene SJ17372

  • transcription-direction:
    • negative
  • right-end-position:
    • 58333
  • left-end-position:
    • 38478
  • centisome-position:
    • 14.6283045

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06255&oldid=54207"