Difference between revisions of "SJ06256"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1302 CPD-1302] == * common-name: ** 5-methyltetrahydropteroyl tri-l-glutamate * smiles: **...")
(Created page with "Category:gene == Gene SJ06256 == * transcription-direction: ** negative * right-end-position: ** 256886 * left-end-position: ** 247695 * centisome-position: ** 51.69046...")
 
(7 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1302 CPD-1302] ==
+
== Gene SJ06256 ==
−
* common-name:
+
* transcription-direction:
−
** 5-methyltetrahydropteroyl tri-l-glutamate
+
** negative
−
* smiles:
+
* right-end-position:
−
** cn1([ch](cnc2(n=c(nc(=o)c1=2)n))cnc3(=cc=c(c(=o)nc(c([o-])=o)ccc(nc(c([o-])=o)ccc(nc(c([o-])=o)ccc(=o)[o-])=o)=o)c=c3))
+
** 256886
−
* inchi-key:
+
* left-end-position:
−
** hvrnkdvlfavcjf-vjantymqsa-j
+
** 247695
−
* molecular-weight:
+
* centisome-position:
−
** 713.66
+
** 51.69046   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[HOMOCYSMET-RXN]]
+
* [[S.japonica_carotenoid_curated]]
−
* [[RXN-12730]]
+
== Reaction(s) associated ==
−
== Reaction(s) known to produce the compound ==
+
* [[ATPASE-RXN]]
−
* [[HOMOCYSMET-RXN]]
+
** Category: [[annotation]]
−
== Reaction(s) of unknown directionality ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: common-name=5-methyltetrahydropteroyl tri-l-glutamate}}
+
** Category: [[orthology]]
−
{{#set: inchi-key=inchikey=hvrnkdvlfavcjf-vjantymqsa-j}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: molecular-weight=713.66}}
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=256886}}
 +
{{#set: left-end-position=247695}}
 +
{{#set: centisome-position=51.69046    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ06256

  • transcription-direction:
    • negative
  • right-end-position:
    • 256886
  • left-end-position:
    • 247695
  • centisome-position:
    • 51.69046

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06256&oldid=132159"