Difference between revisions of "SJ06369"

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(Created page with "Category:gene == Gene SJ00836 == * transcription-direction: ** positive * right-end-position: ** 556530 * left-end-position: ** 542908 * centisome-position: ** 97.1411...")
(Created page with "Category:gene == Gene SJ11016 == * transcription-direction: ** negative * right-end-position: ** 1352940 * left-end-position: ** 1347399 * centisome-position: ** 93.279236...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00836 ==
+
== Gene SJ11016 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 556530
+
** 1352940
 
* left-end-position:
 
* left-end-position:
−
** 542908
+
** 1347399
 
* centisome-position:
 
* centisome-position:
−
** 97.1411    
+
** 93.279236    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.3.1.168-RXN]]
−
* [[3.6.3.6-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[2KETO-3METHYLVALERATE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[DHRT_LPAREN_2mbcoa_RPAREN_]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[DHRT_LPAREN_ibcoa_RPAREN_]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[ISOVALERYLCOA-DHLIPOAMIDE-RXN]]
−
* [[ATPSYN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[MBCOA-DHLIPOAMIDE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7219]]
+
* [[PWY-5046]]
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-5108]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[ILEUDEG-PWY]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7184]]
+
{{#set: transcription-direction=negative}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=1352940}}
−
* [[PWY-6545]]
+
{{#set: left-end-position=1347399}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=93.279236   }}
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=556530}}
 
−
{{#set: left-end-position=542908}}
 
−
{{#set: centisome-position=97.1411   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=3}}

Revision as of 08:19, 15 March 2021

Gene SJ11016

  • transcription-direction:
    • negative
  • right-end-position:
    • 1352940
  • left-end-position:
    • 1347399
  • centisome-position:
    • 93.279236

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5046
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5108
    • 2 reactions found over 3 reactions in the full pathway
  • ILEUDEG-PWY
    • 5 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06369&oldid=121624"