Difference between revisions of "SJ06382"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP] == * common-na...")
(Created page with "Category:gene == Gene SJ06382 == * transcription-direction: ** positive * right-end-position: ** 154897 * left-end-position: ** 120228 * centisome-position: ** 25.259045...")
 
(7 intermediate revisions by 2 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP] ==
+
== Gene SJ06382 ==
−
* common-name:
+
* transcription-direction:
−
** 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine
+
** positive
−
* smiles:
+
* right-end-position:
−
** cc1(n=c(n)c(=cn=1)cop(op([o-])([o-])=o)([o-])=o)
+
** 154897
−
* inchi-key:
+
* left-end-position:
−
** agqjqcfepuvxnk-uhfffaoysa-k
+
** 120228
−
* molecular-weight:
+
* centisome-position:
−
** 296.093
+
** 25.259045   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[RXN-12610]]
+
* [[S.japonica_carotenoid_curated]]
−
* [[RXN-12611]]
+
== Reaction(s) associated ==
−
* [[THI-P-SYN-RXN]]
+
* [[3.6.4.4-RXN]]
−
== Reaction(s) known to produce the compound ==
+
** Category: [[annotation]]
−
* [[PYRIMSYN3-RXN]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
== Reaction(s) of unknown directionality ==
+
* [[ATPASE-RXN]]
−
{{#set: common-name=4-amino-2-methyl-5-(diphosphomethyl)pyrimidine}}
+
** Category: [[annotation]]
−
{{#set: inchi-key=inchikey=agqjqcfepuvxnk-uhfffaoysa-k}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: molecular-weight=296.093}}
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=154897}}
 +
{{#set: left-end-position=120228}}
 +
{{#set: centisome-position=25.259045    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ06382

  • transcription-direction:
    • positive
  • right-end-position:
    • 154897
  • left-end-position:
    • 120228
  • centisome-position:
    • 25.259045

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06382&oldid=132032"