Difference between revisions of "SJ06429"

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(Created page with "Category:gene == Gene SJ04262 == * transcription-direction: ** negative * right-end-position: ** 108415 * left-end-position: ** 101221 * centisome-position: ** 92.824974...")
(Created page with "Category:gene == Gene SJ11952 == * transcription-direction: ** positive * right-end-position: ** 29619 * left-end-position: ** 21165 * centisome-position: ** 5.8367047...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04262 ==
+
== Gene SJ11952 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 108415
+
** 29619
 
* left-end-position:
 
* left-end-position:
−
** 101221
+
** 21165
 
* centisome-position:
 
* centisome-position:
−
** 92.824974    
+
** 5.8367047    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DIACYLGLYKIN-RXN]]
+
* [[AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NAD-KIN-RXN]]
+
* [[RXN3DJ-170]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-221]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TYROSINE-DECARBOXYLASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7039]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-3181]]
−
* [[PWY-7817]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
* [[PWY-581]]
−
* [[NADPHOS-DEPHOS-PWY-1]]
+
** '''5''' reactions found over '''12''' reactions in the full pathway
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-5473]]
−
* [[PWY-7269]]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-5877]]
−
* [[PWY-7268]]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-6326]]
−
* [[NADPHOS-DEPHOS-PWY]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6307]]
−
* [[PWY-5083]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-7936]]
−
{{#set: transcription-direction=negative}}
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
{{#set: right-end-position=108415}}
+
* [[PWY-5290]]
−
{{#set: left-end-position=101221}}
+
** '''2''' reactions found over '''16''' reactions in the full pathway
−
{{#set: centisome-position=92.824974   }}
+
* [[PWY-6030]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY66-301]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5426]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5403]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-3581]]
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5254]]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6133]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7297]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6802]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7826]]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY-5474]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=29619}}
 +
{{#set: left-end-position=21165}}
 +
{{#set: centisome-position=5.8367047   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=19}}

Revision as of 09:25, 27 August 2019

Gene SJ11952

  • transcription-direction:
    • positive
  • right-end-position:
    • 29619
  • left-end-position:
    • 21165
  • centisome-position:
    • 5.8367047

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-3181
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-581
    • 5 reactions found over 12 reactions in the full pathway
  • PWY-5473
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5877
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6326
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6307
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7936
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5290
    • 2 reactions found over 16 reactions in the full pathway
  • PWY-6030
    • 1 reactions found over 4 reactions in the full pathway
  • PWY66-301
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5426
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5403
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-3581
    • 6 reactions found over 11 reactions in the full pathway
  • PWY-5254
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6133
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7297
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6802
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7826
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-5474
    • 1 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06429&oldid=29650"