Difference between revisions of "SJ06444"
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(Created page with "Category:gene == Gene SJ21032 == * transcription-direction: ** negative * right-end-position: ** 80539 * left-end-position: ** 54036 * centisome-position: ** 26.951698...") |
(Created page with "Category:gene == Gene SJ02846 == * transcription-direction: ** negative * right-end-position: ** 434950 * left-end-position: ** 431511 * centisome-position: ** 80.95421...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ02846 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 434950 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 431511 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 80.95421 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[BIS5-ADENOSYL-TRIPHOSPHATASE-RXN]] |
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[OMEGA-AMIDASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-1404]] |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-5026]] |
− | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-581]] |
− | ** '''5''' reactions found over ''' | + | ** '''5''' reactions found over '''12''' reactions in the full pathway |
+ | * [[PWYQT-4476]] | ||
+ | ** '''1''' reactions found over '''13''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=434950}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=431511}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=80.95421 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 11:12, 15 January 2021
Contents
Gene SJ02846
- transcription-direction:
- negative
- right-end-position:
- 434950
- left-end-position:
- 431511
- centisome-position:
- 80.95421
Organism(s) associated with this gene
Reaction(s) associated
- BIS5-ADENOSYL-TRIPHOSPHATASE-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- OMEGA-AMIDASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-1404
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-5026
- 1 reactions found over 1 reactions in the full pathway
- PWY-581
- 5 reactions found over 12 reactions in the full pathway
- PWYQT-4476
- 1 reactions found over 13 reactions in the full pathway