Difference between revisions of "SJ06456"
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(Created page with "Category:gene == Gene SJ20077 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * NARINGENIN-CHALCONE-SYNT...") |
(Created page with "Category:gene == Gene SJ10724 == * transcription-direction: ** negative * right-end-position: ** 14456 * left-end-position: ** 6705 * centisome-position: ** 24.51554 =...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10724 == |
| + | * transcription-direction: | ||
| + | ** negative | ||
| + | * right-end-position: | ||
| + | ** 14456 | ||
| + | * left-end-position: | ||
| + | ** 6705 | ||
| + | * centisome-position: | ||
| + | ** 24.51554 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.1.1.128-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[QUERCETIN-3-O-METHYLTRANSFERASE-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| − | + | * [[RXN-13935]] | |
| − | * [[RXN- | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| − | *** source: [[ | + | * [[RXN-5141]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-3581]] |
| − | ** '''6''' reactions found over ''' | + | ** '''6''' reactions found over '''11''' reactions in the full pathway |
| − | + | * [[PWY-6064]] | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | * [[PWY- | ||
** '''1''' reactions found over '''2''' reactions in the full pathway | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[PWY-7161]] |
| − | ** ''' | + | ** '''1''' reactions found over '''9''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7163]] |
| − | ** ''' | + | ** '''1''' reactions found over '''4''' reactions in the full pathway |
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=14456}} | ||
| + | {{#set: left-end-position=6705}} | ||
| + | {{#set: centisome-position=24.51554 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 11:05, 15 January 2021
Contents
Gene SJ10724
- transcription-direction:
- negative
- right-end-position:
- 14456
- left-end-position:
- 6705
- centisome-position:
- 24.51554
Organism(s) associated with this gene
Reaction(s) associated
- 2.1.1.128-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- QUERCETIN-3-O-METHYLTRANSFERASE-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- RXN-13935
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- RXN-5141
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-3581
- 6 reactions found over 11 reactions in the full pathway
- PWY-6064
- 1 reactions found over 2 reactions in the full pathway
- PWY-7161
- 1 reactions found over 9 reactions in the full pathway
- PWY-7163
- 1 reactions found over 4 reactions in the full pathway
