Difference between revisions of "SJ06456"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=1-Alkyl-2-acyl-glycerol-3-phosphate 1-Alkyl-2-acyl-glycerol-3-phosphate] == * common-name: ** a...")
(Created page with "Category:gene == Gene SJ06456 == * transcription-direction: ** positive * right-end-position: ** 48229 * left-end-position: ** 23153 * centisome-position: ** 4.8691187...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=1-Alkyl-2-acyl-glycerol-3-phosphate 1-Alkyl-2-acyl-glycerol-3-phosphate] ==
+
== Gene SJ06456 ==
−
* common-name:
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* transcription-direction:
−
** a 2-acyl-1-alkyl-sn-glycerol 3-phosphate
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** positive
−
== Reaction(s) known to consume the compound ==
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* right-end-position:
−
* [[RXN-17730]]
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** 48229
−
== Reaction(s) known to produce the compound ==
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* left-end-position:
−
* [[RXN-17729]]
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** 23153
−
== Reaction(s) of unknown directionality ==
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* centisome-position:
−
{{#set: common-name=a 2-acyl-1-alkyl-sn-glycerol 3-phosphate}}
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** 4.8691187   
 +
== Organism(s) associated with this gene  ==
 +
* [[S.japonica_carotenoid_curated]]
 +
== Reaction(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ACYLCOADEHYDROG-RXN]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ALCOHOL-DEHYDROGENASE-NADP+-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[ALDEHYDE-DEHYDROGENASE-NADP+-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[ALDHDEHYDROG-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[R222-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10089]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10715]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10717]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10780]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10912]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10917]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12484]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14023]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14209]]
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** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14224]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14225]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14280]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-16653]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16654]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16655]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16656]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17808]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-3443]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-37]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-4142]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-5581]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-6002]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-6382]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8582]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8583]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9758]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9910]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-3]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-472]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-476]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-479]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN6666-5]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[FAO-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7269]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6766]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6763]]
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6444]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[TOLUENE-DEG-CATECHOL-PWY]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-1501]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6446]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[P221-PWY]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6181]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6307]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6313]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6342]]
 +
** '''8''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7178]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-2221]]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-0]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-2724]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-2501]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3162]]
 +
** '''2''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-3641]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3981]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5760]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5429]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5428]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6054]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6055]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6104]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7387]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-21]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-162]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-161]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-387]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY66-388]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-389]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY6666-2]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7431]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=48229}}
 +
{{#set: left-end-position=23153}}
 +
{{#set: centisome-position=4.8691187    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=41}}
 +
{{#set: nb pathway associated=36}}

Latest revision as of 11:04, 18 March 2021

Gene SJ06456

  • transcription-direction:
    • positive
  • right-end-position:
    • 48229
  • left-end-position:
    • 23153
  • centisome-position:
    • 4.8691187

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7269
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6766
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6763
    • 1 reactions found over 11 reactions in the full pathway
  • PWY-6444
    • 1 reactions found over 4 reactions in the full pathway
  • TOLUENE-DEG-CATECHOL-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1501
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6446
    • 2 reactions found over 3 reactions in the full pathway
  • P221-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6181
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6307
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6313
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6342
    • 8 reactions found over 13 reactions in the full pathway
  • PWY-7178
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-2221
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-0
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-2724
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-2501
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-3162
    • 2 reactions found over 13 reactions in the full pathway
  • PWY-3641
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3981
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5760
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5429
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5428
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6054
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6055
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6104
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7387
    • 1 reactions found over 3 reactions in the full pathway
  • PWY66-21
    • 3 reactions found over 3 reactions in the full pathway
  • PWY66-162
    • 3 reactions found over 3 reactions in the full pathway
  • PWY66-161
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-387
    • 4 reactions found over 6 reactions in the full pathway
  • PWY66-388
    • 2 reactions found over 7 reactions in the full pathway
  • PWY66-389
    • 4 reactions found over 4 reactions in the full pathway
  • PWY6666-2
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7431
    • 3 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06456&oldid=133210"