Difference between revisions of "SJ06456"

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(Created page with "Category:gene == Gene SJ09944 == * transcription-direction: ** negative * right-end-position: ** 184963 * left-end-position: ** 151837 * centisome-position: ** 37.78083...")
(Created page with "Category:gene == Gene SJ20077 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * NARINGENIN-CHALCONE-SYNT...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ09944 ==
+
== Gene SJ20077 ==
* transcription-direction:
 
** negative
 
* right-end-position:
 
** 184963
 
* left-end-position:
 
** 151837
 
* centisome-position:
 
** 37.78083   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[PROTEIN-KINASE-RXN]]
+
* [[NARINGENIN-CHALCONE-SYNTHASE-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
{{#set: transcription-direction=negative}}
+
* [[RXN-7645]]
{{#set: right-end-position=184963}}
+
** Category: [[orthology]]
{{#set: left-end-position=151837}}
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
{{#set: centisome-position=37.78083    }}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6787]]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY1F-FLAVSYN]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5135]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7397]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6316]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7897]]
 +
** '''3''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5059]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=7}}

Revision as of 18:45, 14 January 2021

Gene SJ20077

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6787
    • 6 reactions found over 10 reactions in the full pathway
  • PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5135
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7397
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6316
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7897
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-5059
    • 3 reactions found over 5 reactions in the full pathway