Difference between revisions of "SJ06465"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ08954 == * transcription-direction: ** negative * right-end-position: ** 127674 * left-end-position: ** 121909 * centisome-position: ** 28.448647...")
 
(Created page with "Category:gene == Gene SJ06465 == * transcription-direction: ** positive * right-end-position: ** 379660 * left-end-position: ** 370854 * centisome-position: ** 77.99128...")
 
(9 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08954 ==
+
== Gene SJ06465 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 127674
+
** 379660
 
* left-end-position:
 
* left-end-position:
−
** 121909
+
** 370854
 
* centisome-position:
 
* centisome-position:
−
** 28.448647    
+
** 77.99128    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10815]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=positive}}
−
== Pathway(s) associated ==
+
{{#set: right-end-position=379660}}
−
* [[PWY-7432]]
+
{{#set: left-end-position=370854}}
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
{{#set: centisome-position=77.99128   }}
−
* [[TYRFUMCAT-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-1581]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-1422]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6318]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=127674}}
 
−
{{#set: left-end-position=121909}}
 
−
{{#set: centisome-position=28.448647   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=5}}
 

Latest revision as of 11:10, 18 March 2021

Gene SJ06465

  • transcription-direction:
    • positive
  • right-end-position:
    • 379660
  • left-end-position:
    • 370854
  • centisome-position:
    • 77.99128

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06465&oldid=136237"